ProtocolOS
Workflow

From a methods paragraph to a lab that remembers

Ingest, configure, execute, diagnose, export — an active assistant on the bench, not a static notebook after the fact.

  1. Step 1 — Ingest & graph

    Paste Materials & Methods text or drop a paper screenshot. OCR and the compiler turn it into an executable DAG. Templates live in a dedicated Protocol Library tab — not mixed into experiment logs.

    qPCR, Western blot, biofilm, ELISA, Bradford, TCID50, plaque.

  2. Step 2 — Pre-run setup

    Dragging a protocol onto the canvas pauses on a setup modal. Set sample count, replicates, plate format, and pipetting margins before anyone starts the first incubation.

    24 samples × 3 replicates · +10% overage · 96-well.

  3. Step 3 — Execute with modular tools

    Follow the Discord-style bench. + Add Tool on any step for a countdown timer, dynamic media-prep card (LB / agar masses recalc with volume), or a dilution calculator. The ChatBar scales master mix and troubleshoots in place.

    + Add Timer · + Add Calculator · media prep scaling.

  4. Step 4 — Triage & diagnose

    Photograph smeared gels, blank blots, or instrument error codes in the Live Demo. The dedicated workspace Diagnostics copilot is coming soon.

    Live Demo · workspace copilot coming soon.

  5. Step 5 — Quantify & export

    Assay tables and timestamped parameters write into the run log. PDF / Markdown export is live. Lab-wide sharing across seats is coming soon.

    Exportable run logs · lab sharing coming soon.

Open the bench workspace →